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Genes to Cells (2004) 9, 179-191. doi:10.1111/j.1356-9597.2004.00716.x
© 2004 Blackwell Publishing or its licensors

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Distinct roles of DNA polymerases delta and epsilon at the replication fork in Xenopus egg extracts

Tomoyuki Fukui1,3, Kazumi Yamauchi2, Taketo Muroya2, Masahiro Akiyama2, Hisaji Maki2, Akio Sugino1,3,4 and Shou Waga1,3,4,*

1 Department of Biochemistry and Molecular Biology, Research Institute for Microbial Diseases, Osaka University, 3-1 Yamada-oka, Suita, Osaka 565-0871, Japan
2 Nara Institute of Science and Technology, Ikoma, Nara, Japan
3 Department of Biology, Graduate School of Science, Osaka University, Osaka, Japan
4 Laboratories for Biomolecular Network, Graduate School of Frontier Biosciences, Osaka University, Osaka, Japan

DNA polymerases {delta} and {varepsilon} (Pol{delta} and Pol{varepsilon}) are widely thought to be the major DNA polymerases that function in elongation during DNA replication in eukaryotic cells. However, the precise roles of these polymerases are still unclear. Here we comparatively analysed DNA replication in Xenopus egg extracts in which Pol{delta} or Pol{varepsilon} was immunodepleted. Depletion of either polymerase resulted in a significant decrease in DNA synthesis and accumulation of short nascent DNA products, indicating an elongation defect. Moreover, Pol{delta} depletion caused a more severe defect in elongation, as shown by sustained accumulation of both short nascent DNA products and single-stranded DNA gaps, and also by elevated chromatin binding of replication proteins that function more frequently during lagging strand synthesis. Therefore, our data strongly suggest the possibilities that Pol{delta} is essential for lagging strand synthesis and that this function of Pol{delta} cannot be substituted for by Pol{varepsilon}.


Communicated by: Hiroyuki Araki

* Correspondence: E-mail: swaga{at}biken.osaka-u.ac.jp




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